The phrase "alignment covering" is not a standard expression in written English, and its meaning may not be clear without context.
It could potentially be used in specific technical or academic contexts where "alignment" and "covering" are relevant concepts, such as in discussions about data alignment or coverage in research.
Example: "The alignment covering of the data sets ensures that all relevant variables are accounted for in the analysis."
Alternatives: "alignment framework" or "coverage alignment".
The cemetery consists of neat lines of graves arranged on an east west alignment, covering a nearly square area of about 36 x 34 m, in a layout not seen in any other known Anglo-Saxon cemetery.
In step 1, a preexisting alignment covering the region of interest was considered and conserved primer locations were selected based on alignment positional entropy.
The resulting dataset has: ~740,000 repeats from the human/macaque alignment, covering 92.8 Mb; ~120,000 repeats from the mouse/rat alignment, covering 12.6 Mb; and ~620,000 repeats from the dog/cow alignment covering 63 Mb.
Only proteins showing an alignment covering at least 80% of the COG PSSM with an E-value ≤ 10-6 weretainedned.
Each zebrafish TFR was mapped to a single locus in the human genome using the UCSC whole genome alignments to identify the best alignment covering the greatest number of bases in each TFR (see Methods).
If no editing is present in a reference database, it is checked whether there is actually no alignment covering this single position or if the alignment does not predict an editing event ('0'0.
It is worth noting that these hits were not well conserved across the species tested and the alignments cover less than 50% of the LSGs with most alignments covering 10-20%.
Sequence alignments covering at least 80% of the length of BoHV-1 pre-miRNA were considered as potential orthologs and used in further RNA secondary structure analyses.
We took advantage of 4,677 alignments covering a total of 9.78Mb of human, chimp, and baboon non-coding DNA curated by Julien Meunier [12].
The J2315 gene sequences were searched against the genomic sequences using the BLASTN algorithm version 2.2.18 (nucleotide level) [36] for matches that provided alignments covering at least 70% of the length of the query sequence (homolog present).
After these filters, the final data sets consist of 287 alignments covering 203 RNA families for EPO-35, 124 alignments covering 107 RNA families for EPO-12, and 182 alignments covering 149 families for Multiz.
