The phrase "alignment clearly" is not correct and lacks clarity in written English.
It may be intended to convey the idea of making alignment evident or understandable, but it needs additional context or restructuring to be effective.
Example: "The report should demonstrate alignment clearly between the team's goals and the company's objectives."
Alternatives: "alignment evident" or "alignment apparent".
The board is responsible for explaining this alignment clearly to shareholders, employees and other stakeholders," says the FRC in its report.
However, the sequence alignment clearly showed hypervariability in a certain region (data not shown).
Analysis of cell morphology and actin filament alignment clearly revealed adherence.
The MAUVE genome alignment clearly indicated inversions of large DNA fragments including one or more collinear blocks.
The alignment clearly shows that the sequences near the proteolytic cleavage site group into two different types.
Data from Vukich et al. [ 30] CLUSTAL alignment clearly showed conserved putative TATA box promoter both in the Gypsy (TATAAA) and in the Copia (TATATATA) LTRs.
Multiple alignments clearly show that these features are highly conserved and are very similar to those observed not only in other teleost fish, but also in mammals.
Multiple sequence alignments clearly indicated the presence of both type I and type II metacaspases in chlorophytes, Chlamydomonas reinhardtii (CrMC1 and CrMC2) and Volvox carteri (VcMC1 and VcMC2).
The multiple alignments clearly demonstrated that at least two different types of proteins were represented (2, 6 and 8 versus 4 and 7).
Not surprisingly, comparative sequence analysis of the multiple alignments clearly indicated that the average mutational impacts of substitutions on the flexibility of codons (dTRX) were far greater, in those four substitution types which alter the local GC content.
A concatenated super gene of all 988 alignments clearly favoured topology B over topology A, which again has a higher likelihood than topology C, consistent with the results from the individual gene comparisons (Table 2).
