The phrase "alignment chip" is correct and usable in written English.
It can be used in contexts related to technology, electronics, or gaming, where it refers to a component that helps align or calibrate a system.
Example: "The technician replaced the faulty alignment chip to ensure the device operated correctly."
Alternatives: "calibration chip" or "adjustment chip".
They were aided by play-calling (lots of shotgun and quick drops in the passing) and alignment (chip-blocking help by running backs and tight ends, especially for right tackle Bobby Massie).
Typical examples in the field of (epi- genomics includepi- genomicsalinclude, ChIP-seq peak calling and RNA-seq transcript qualignmention.
Data alignment: ChIP-sequencing data, fastq files, (Mock, 1 sample; IGF overexpression, 2 samples; WT, 2 samples) were aligned against the mouse unmasked genome (NCBI mm9) using the SHRIMP alignment software [ 45].
The SOAP version 2.20 alignment tool was used to align ChIP-Seq reads to the mouse genome build mm9 (Li et al., 2009).
Standard NimbleGen probes were also placed on the array, including alignment probes, chip identification probes, and random cDNA probes designed to match the content of our user designed probes.
This paper describes the first demonstration of active monitoring of chip-to-chip alignment during thermal cycling, in a PxC-enabled package.
The ChIP alignment pattern was quite distinct for NSC-derived predictions in ESC cultures.
The intensities for positive controls (blue) and negative controls (red) were plotted as a function of probe cell column position to determine the quality of grid alignment for each chip.
Performing the same alignment analysis with ChIP-defined insulator binding peaks [31] results in similar patterns, thereby confirming the validity of our findings with data from an independent experiment and technique (Fig. S3c).
For bisulfite alignment used in ChIP-Seq data analysis, only Gnumap, mrsFAST, Novoalign (http://www.novocraft.com/), RMAP, and Segemehl [ 19] were demonstrated to support this function.
After alignment of the ChIP-seq reads with the M. xanthus genome [ 10], the alignments were analyzed with QuEST, a statistical tool that has been shown to detect, with high accuracy and positional resolution, genomic regions associated with ChIP-seq peaks of significant enrichment compared with a control [ 52].
