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Nowadays, the assembly of laser systems is dominated by manual operations, involving elaborate alignment by means of adjustable mountings.
We have performed flight tests at cruising speed and altitude in which we took due account of this alignment by means of an array processing technique which is capable of determining the flow direction for each frequency bin under consideration.
Shape alignment by means of partial OPA involves two steps: translation and rotation [ 21].
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Separate HMMER profiles were constructed for the MEROPS A1A and A1B alignments by means of "hmmbuild" using default settings (HMMER Version 3.0; Eddy 2011).
The initial state in this iterative routine corresponds to a rough alignment where micrographs are aligned by means of simple cross-correlations.
The device is composed of a positioning stage and a vacuum sample-holder, which can be aligned by means of two alignment screws.
The DNA-sequences were multiply aligned by means of the ClustalX v1.83 [ 37] and the alignments were manually refined using the GeneDoc v2.7 [ 38].
For the sequence data sets, the table cells can contain F, C and R letters that provide links to Fasta files, color-coded multiple sequence alignments computed by means of MUSCLE (20) in Clustal W format and residue repertoires, respectively.
Finally, the highway alignment is defined by means of a parametric cubic smoothing spline.
The mentioned percentages were pairwise alignment scores obtained by means of ClustalW2.
Structure similarity searches were conducting using the DALIlite program [ 158] and structural alignments were generated by means of the MUSTANG program [ 159].
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