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The phrase "alignment at random" is correct and usable in written English.
It can be used in contexts discussing randomness or lack of a specific order in alignment, such as in statistical analysis or experimental design.
Example: "The results showed that the alignment at random did not significantly affect the outcome of the experiment."
Alternatives: "random alignment" or "alignment by chance".
Exact(1)
It works as follows [ 9, 6]: for a fixed alignment of sequences, a collection of new alignments is generated by deleting some columns from the alignment at random and replacing them by other columns from that alignment, also picked at random.
Similar(59)
Also, the option "-k1" was elected, i.e. if in the course of the search Bowtie found 2 (or more) possible alignments for a given read, the program selected one of the alignments at random.
An algorithm for reference-guided assembly has three choices [ 13]: 1) to ignore (hence discard) all multi-reads; 2) to perform the best match approach, in which only the best alignment is reported or, if equally good best match alignments occur, one at random or all of them are reported; 3) to report all alignments up to a maximum number.
Similar to Bowtie2, Stampy reports the single best alignment, selecting one result at random when more than one alignment shares the best mapping quality.
For each gene family, the alignment with the highest norMD score was used and where more than one alignment had an equal top score the alignment method was chosen at random.
To solve (4), current algorithms begin at random initial alignment positions and attempt to converge to an alignment of l - mers in all of the sequences that maximize the objective function.
If there are multiple alignments with the same alignment score, a single result is selected at random.
Also, there seems to be an alignment bug that cuts off text at random.
The meat goes onto buttered toast with more dill and perhaps a touch of lemon juice, either piled on at random or arranged in perfect alignment by fastidious spirits like Etel, the ambassador's wife.
Except for the constraint on alignment, the locations of pair members were chosen at random.
A subset of 72 protein pairs was selected at random from the 408 pairs of proteins in the alignment dataset (see Section 2.6), and alignments made with perturbations of the default FUGUE gap penalties.
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