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Exact(3)
We return the database treatment with the highest scoring alignment, as defined by Equation (8).
The "relative orthology with mouse" feature took advantage of the fact that retrocopies inserted since the mouse/human divergence show a break in the human-mouse genomic alignment as defined by the UCSC syntenic alignment nets [ 62].
No significant difference existed for foot progression angle at flat foot between conditions, with all conditions landing within 1° of the zero alignment, as defined by the standing reference trial (Standard: 0.1° ± 1.6; Brace: 0.8° ± 1.5; High Top: 0.1° ± 1.9).
Similar(57)
Here we provide a gradient-guided refinement framework for subtomogram alignment that minimizes a dissimilarity score as defined by the squared sum of the differences between a parameter fixed function and a function whose parameters are optimized.
criteria as defined by bank.
We calculated this proportion by summing up all bases that fall into alignment regions as defined by alignment start and end coordinates.
The 'most suitable' primer tuple is defined as the tuple with the most similar score to the average score of the current primer tuples set, while satisfying cross-tuple alignment constraints as defined by the user.
The sequences in the trusted alignment were clustered by single linkage by pairwise identity (as defined by the original alignment) and split into a smaller training alignment subset and a testing set, so as to minimize pairwise identity between training and test data and create more challenging alignment tests.
(D ) FG domains included residues from translation start till the last FG dipeptide but excluded the GLEBS domain (as defined by alignment with the ScNup116 GLEBS domain).
The Deletion_search tool of 'galign' identifies all positions in the genome that have no sequence reads, wild-type or mutant, as defined by the alignment tool output file.
The "bed" file describes the pattern of aligned blocks between matching segments of consensus and genomic sequence, and the fasta file contains concatenated segments of genomic sequence as defined by these alignment blocks.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com