Sentence examples for alignment approaches for from inspiring English sources

To align the DNA sequences from the three genomes, we refrained from progressive alignment approaches (for example, clustalw) because divergence estimates were found to be very sensitive to alignment order.

The most recent study utilized only MinION™ reads to resolve human gene copy number while demonstrating the utility of novel alignment approaches for nanopore data.

This paper proposes a new anti-disturbance fault tolerant alignment approach for a class of INSs subjected to multiple disturbances and system faults.

This result suggests that this WGS plasmid alignment approach for the estimation of plasmid copy number is fairly accurate.

Meanwhile, we have introduced a new profile-profile alignment approach for the I-TASSER fragment collection, and a new neural network-trained hydrophobic potential, which has been implemented in a reduced Monte Carlo simulation for the first time.

Profile HMMs are a model-based alternative to the ad-hoc multiple alignment approaches common for sequence family modeling.

However, implementation of BLAST and local alignment approaches would be impossible for analyses of thousands of sequences generated from environmental studies, because knowledge of community structures of the samples is generally lacking.

Each random database was submitted to the same all-versus-all alignment approach used for the real data, and the distribution of alignment scores considered the mean ± SD.

Difficulties in detecting DS relationships for conventional structural alignment approaches originate in the nature of the algorithms.

This is a fundamental limitation for all automated alignment approaches.

If they are defined, then the system could be modeled as a complex network, and multiple network alignment approaches [ 3, 4] that look for subgraphs that co-occur across multiple network instances for the same system's phenotype are putative candidates for the target component interplays.