Sentence examples for alignment and comparison from inspiring English sources

Algorithms for large-scale genome alignment and comparison, followed by methods for modeling protein structure are considered.

The alignment and comparison of LAMAI 31 β-tubulin sequence showed high similarity with two different species: Aspergillus cf. tubingensis and Aspergillus pulverulentus.

Also presented is new information on the structure and function of UGTs obtained by molecular modeling, bioinformatics (sequence alignment), and comparison with selected crystallized glycosyltransferases. Finally, we discuss the important, and still not fully developed, issue of UGT active site architecture and organization within the ER.

Previous research has also shown that "Scan-vs-BIM" systems that are based on the geometric alignment and comparison of as-built laser scans with as-designed BIM models can effectively recognize and identify MEP components as long as they are constructed near their as-planned locations.

Sequence alignment and comparison were accomplished using the Clustal W algorithm (Slow-Accurate option) in Lasergene's MegAlign (DNASTAR) and the MacVector software (version 11.1.2, MacVector, Inc).

Four domains in the SVCV-C1 G protein were determined by alignment and comparison of the secondary structures with PyMOL software (DeLano Scientific, http://www.pymol.org).org

Inspection of the alignment and comparisons to similar alignments produced using CLUSTALW [ 16] showed that the MUSCLE alignment was better at correctly aligning the zinc coordinating amino acids and fewer manual adjustments were required than with CLUSTALW results (data not shown).

Sequence alignments and comparison were conducted using ClustalW [ 52].

Whole genome alignments and comparison between the assembled scaffolds of both UM isolates were performed using NUCmer version 3.1 from MUMmer package version 3.23 [ 26] with default parameters.

This integration facilitates the assessment of regions of interest through comparison between each optical map cell line and the wealth of other data the browser offers, such as BAC library end sequence alignments, cDNA alignments and comparison to other assemblies.

The alignments and comparison of the OsPTR full-length protein sequences and the PTR domain sequences illustrated that most of the amino acids in TM regions in or out of the PTR domain in members of the same phylogenetic subfamily were very conservative.