Sentence examples for aligning methods from inspiring English sources

To brief survey, prior aligning methods can be classified as feature- and area-based methods [9, 11].

In order to allow the comparison of the resulting DDLs with standard layouts produced by Cytoscape and to transform one into another, DeDaL implements simple layout morphing and aligning methods.

One is the human genome aligning method with open reading frame (ORF) coding method (60 transcripts).

Multiple alignment methods based on probabilistic consistency have demonstrated great promise in the context of amino-acid alignment [75] and aligning collinear genomic regions [33], and in principle, could be extended to genome alignment with rearrangement.

The biggest challenge in aligning mRNA reads is that these often span splice junctions and a specific alignment method for this problem is required.

These approaches are not only much faster than conventional alignment-based methods, but they also overcome some notorious difficulties in phylogenomics, such as finding ortholog genes (Ebersberger et al., 2009; Schreiber et al., 2009) or aligning large genomic sequences (Darling et al., 2010).

Experiments on the BAliBASE 2.0 database were conducted and the results confirm that MSAGMOGA obtains the results with better accuracy statistical significance compared with the three well-known methods in aligning multiple sequence alignment with affine gap.

Methods for aligning 3D fetal neurosonography images must be robust to (i) intensity variations, (ii) anatomical and age-specific differences within the fetal population, and (iii) the variations in fetal position.

When a city decides to approach its infrastructure with an eye towards resilience, it needs new methods for aligning public and private interests to help cities find financially viable projects.

We evaluated the performance of both methods by aligning predicted mRNA sequences to the annotated mRNA sequences.

While methods for aligning whole genomes are generally focused on nucleotide-level assignments, the output of such methods can easily be used to establish gene-level orthology predictions as well.