Sentence examples for aligning it to from inspiring English sources

That is, given a target protein sequence, we can predict its 3D structure by aligning it to structurally similar protein structures in PDB.

The 3′adaptor was removed by aligning it to the read, allowing one or two mismatches in prefix alignments of at least seven or ten bases, respectively.

Her Christmas homily dwells on the goodness, both physical and spiritual, that sports can promote — but in aligning it to the Christian faith, it fails to address the world.

Nevertheless, we estimate that roughly 94.4% of the genome sequence of FV-1 is contained in this dataset by aligning it to the highly similar strain CO92.

To achieve this, the percentage identity (PID) to each representative sequence is calculated, after aligning it to the target using FUGUE.

To make it comparable with fibroblasts data we also performed filtering of fibroblasts reads aligning it to mouse transcriptome as described above.

We translated each ORF sequence into its corresponding protein and aligned it to three protein databases — Refseq, human-nr, and full-nr — in an iterative, subtractive fashion using BLASTP (see Methods).

For example, SSAHA2 aligns read SRR003161.1261578 to X chromosome with mapping quality 244 and BWA-SW aligns it to chromosome 2 with identical alignment length and edit distance.

Wei et al. [ 19] generated a sequence-ready physical map of maize and aligned it to the genome of rice, revealing its complex evolutionary history.

Thus, we re-sequenced the gene hp1018 and aligned it to the published genomic data of H. pylori Hp26695 (Figure 3).

Given an OR sequence and predicted helical boundaries, users can align it to a set of non-redundant GPCR templates in active and inactive states.