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Sequence similarities were observed between GGA16 and human chromosome region 6p21 (containing HLA, the human MHC), or with other human chromosomes (HSA 1, 2, 5, 16, 19, and 21) [ 6], and therefore chicken chrUn or EST sequence aligning by sequence similarity to these human regions are a potential source of supplementary markers.
This was due at least in part to non-unique sequences aligning by partial homology between non-homologous chromosomes in the apple genome, such as chromosome 1/7, 2/15/8, 3/11, 4/12, 5/10, 6/14, 9/17, and 13/16 [ 4, 48].
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The primary sequences of AAT-EC and HDC-MM were aligned by automated alignment procedure.
Aligning step: The 1046 groups were aligned by Muscle, a multiple alignment program [ 23].
The gel images were aligned by automated calculation of alignment vectors.
Sequences from each clade were aligned by the Align 2D structure alignment program (homology module, InsightII; Accelrys), respectively.
For our alignment, protein-coding genes were constrained to align by codon and tRNA-coding genes were constrained to align by regions of potential secondary structure [ 38].
Sequences were aligned by using CLUSTAL W [ 127] with default multiple alignment parameters.
Sequences were aligned by ClustalW using default parameters [ 42] resulting in an alignment of 3455 nt.
Between Russia and Germany, by contrast, the stars seem aligned by those two irrefutable forces, geography and history.
With endless permutations, brokers' business models would align by industries, geographies, and user roles.
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