Sentence examples for aligned with the template from inspiring English sources

The PET images were aligned with the template of a T2-weighted magnetic resonance image using the rigid registration method and PMOD software, version 3.604 (PMOD Technologies).

Briefly, the target sequences were aligned with the template structures, and coordinates from the templates were transferred to the targets TRR1 and KRE2.

In the present study, when the target sequence was aligned with the template sequences during homology modeling procedure, it resulted in aligning the conserved Gly in H5 and hence in our models, the residue at H5 position of ar/R filters is the alternate residue reported in their paper [ 24].

The AAL cortical parcellation map is well aligned with the template brain PET image supplied with the statistical parametric mapping (SPM, Version 8) package (Wellcome Trust Centre for Neuroimaging, London, UK) [ 26], which conforms to the space defined by the international consortium for brain mapping (ICBM) and approximates to the space described in the atlas of Talairach and Tournoux [ 27].

Once templates have been selected, the target protein is then aligned with the templates.

The CT template, aligned with the MRI template, is finally mapped into the patient's space by applying the inverse transformation.

The A1R homology model (Additional file 2) was constructed according to the method reported by Yaziji et al. [59 61], where the protein sequence of the human A1R (accession number P30542) was aligned with the A2AR template of PDB ID: 4EIY.

However, a higher percentage of reads aligned with the reference template for gDNA depleted samples compared to untreated samples (Table  1).

Our previous investigations by modeling and MD methods have shown that this lesion is housed in Polκ like the dG- N-AAF adduct opposite dCTP, with aromatic ring directed 3′ along the modified strand, sandwiched in the gap, protected from solvent, aligned with the DNA template strand, and stacked with Phe171.

Subsequently, the partial volumes were spatially normalized to a standard T1-weighted SPM-template [Ashburner and Friston, 1999] (care was taken that in particular midbrain regions aligned with the standard-template).

The GlyRa1 sequence was aligned with this template using multiple scoring criteria.