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To construct the search model, multiple ferritin protein sequences from eubacteria, archaea and eukaryota were aligned with the program ClustalW [69], and the sequence alignment was compared to known crystallographic structures from the PDB (Table 2).
Students and graduates join an elite global network of 650+ Ivy League alumni who hold pivotal roles, and industry thought-leaders who are aligned with the program.
The sequences were aligned with the program CLUSTAL_X.
(A and B) Amino acid sequences of hTIM-1, hTIM-3, hTIM-4, mTIM 1-4 Ig V domains and hTIM-1, hTIM-4, sialecsialo adhesin (SnD1), respectively were aligned with the program Clustal W (Larkin et al., 2007).
The sequences of amino acids of three LldR homologues, including LldR from P. aeruginosa XMG, E. coli (named ELldR), and C. glutamicum (named CLldR), were aligned with the program CLUSTAL_X (Fig. 2) (Thompson et al. 1997).
Bartow, who followed John Wooden as UCLA basketball coach, wrote in the letter that he believed his life would have been in danger had the NCAA delved too deeply into the activities of the late Sam Gilbert, the Bruin booster who was closely aligned with the program during the Wooden years.
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It's obvious from our endorsements and many of our policy positions that we are aligned with the programs and aims of the Democratic Party on most domestic issues, but certainly not all.
Using this alignment as a template, nucleotide sequences were aligned with the GeneDoc program.
A total of 4 sequences were aligned with the CLUSTAL_W program [ 25] and visually examined with BoxShade Server program.
Sequences were first aligned with the ClustalW program, and the non-aligned segments and gaps were cut with ad hoc perl scripts.
Sequences were aligned with the muscle program [ 38] and then the alignment was manually checked in the MEGA3 browser [ 39] for accuracy.
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