Sentence examples for aligned with parameters from inspiring English sources
A 3D graphic database of artificial teeth, which can be aligned with parameters, was established.
Contigs were aligned with alignment parameters set to > 97% identity and > 40 nucleotides overlap using Sequencher (Gene Codes Corp., Ann Arbor, MI, USA).
Protein sequences were aligned with default parameters in CLUSTALW (http://align.genome.jp/) and outputted as alignments using the BOXSHADE package (http://www.ch.embnet.org/software/BOX_form.html).html
The flanking sequence is aligned with the parameters kmer = 12 seed = 4 cut = 1000 depth = 5 best = 1.
A set of mimotopes obtained above (including 6 dodecapeptides and 5 heptapeptides) was input and aligned with all parameters as defaults.
Transcripts and unigenes were aligned with the parameters: − evalue 1e-5 -outfmt 6 -max_target_seqs 1 -seg no, and then the alignments were filtered for minimum alignment length of 50 amino acids and identity value of ≥30%.
The whole-genome nucleotide level alignment was assembled using T-Coffee [ 63] from 3 separate alignments: 5'-UTR and 3'-UTR aligned with MUSCLE (default parameters), and the amino acid level multiple alignment of the ORFs projected to the nucleotide level using the TRANALIGN programme from the EMBOSS package with default parameters.
Sequences of tRNAs, rRNAs, and noncoding loci were first aligned with the default parameters, then realigned with the refining alignment option.
Standard preprocessing procedures included image realignment (4th Degree B-Spline Interpolation), coregistration (mean EPI aligned with T1 then parameters applied to all EPIs), normalisation and spatial smoothing (Gaussian Kernel full width at the half maximum (FWHM) 8 mm).
All sequences were aligned with default BLAST alignment parameters to the UCD10X v1.0 pseudomolecules to identify the PUN1 sequence.
The first area for continued research is the identification of artists who work in way that are aligned with the processes and parameters of the makerspace.
