The phrase "aligned together with" is not correct in standard written English.
It is redundant because "aligned" already implies a sense of togetherness or coordination.
Example: "The teams were aligned with the project's goals."
Alternatives: "aligned with" or "in alignment with".
All coding sequences having one or more blast hits (other than themselves) with an e-value smaller than 10-30 (9,166 for C. elegans) were retained, translated and were further aligned together with an end-gap-penalty free global alignment [ 28], using the BLOSUM62 matrix.
Similarly, if two DI tags have connections to more common DS tags in the graph, they tend to be aligned together with higher probability.
where ( t=overline{q}-overline{p} ) and R = UV T. As a result, the two point clouds can be aligned together with the obtained rotation matrix and translation vector in (14).
We also found that the thin, long-shape human AEC1 aligned together with microvascular vessels which are positive for capillary endothelial markers CD34 and PECAM/CD31, with approximately 1 μm-thick integrinβ-1+ basement membrane between epithelium and capillary endothelium (Fig. 4A C).
The 18 sequences generated were aligned together with reference sequences downloaded from GenBank using the ClustalX program [18].
The sequences obtained here were aligned together with HCV subtype reference sequences using CLUSTAL W program implemented in MEGA 4.0.
The selected sequences were aligned together and with an out-group comprising sequences of the related WD40 domain protein Lis1, using CLUSTALW in BioEdit and corrected by eye (Supplementary Figures S1 and S2).
Isotigs of each isogroup were aligned together using ClustalX v2.1 with manual editing by Seaview v4.0 [ 93, 94].
Low temperature hydrothermal growth of vertically aligned nanowires together with MEMS surface micromachining and UV-LIGA (Lithographie, Galvanoformung, Abformung) processes were utilized to achieve efficient coupling of environmental vibrations to the nano energy harvester.
The aligned global structure together with the result of the local structure matching finally determines whether the two fingerprints are acquired from the same finger.
In this case, one can first assemble the reads into contigs and then align them together with the reads to the reference.
