Sentence examples for aligned to itself from inspiring English sources

Similarity of sequence contents is an important signal for timing duplication events; if one match in a set of self-alignments (i.e., when a sequence is aligned to itself) has a higher similarity level than others, then that match is likely to be the most recent duplication (Bailey et al. 2002).

We calculated bit score ratios as the bit score of the best match in a KN400-PCA or KN400-RefSeq BLASTp or tBLASTn comparison adjusted by the bit score of the KN400 protein aligned to itself or its own genome.

Each chunk was aligned to itself.

The score ratio is calculated by dividing the raw score by the score of the protein of interest aligned to itself.

All abnormally aligned read pairs deriving from the reference accession, when aligned to itself, serve as a marker for regions of the genome that produce unreliable read alignments (supplementary fig. S1, Supplementary Material online).

Therefore a locus that aligned to several loci, including itself, was likely a repeat sequence and was excluded from the database.

To this end, a sequence is aligned with itself in such a way that any single sequence entry can be aligned to any other entry except itself.

For example, disparate cell-type ontologies including the GO are now integrated into a single ontology that is itself being aligned to a singular implementation.

A locus that aligned to several loci, or a locus that did not align to itself, was removed from the temporary database.

Unmappable regions of the genome were identified and excluded by aligning the genome to itself in 30-mers and reads aligned to these regions were not used in analysis.

Before the snap, the defense has already aligned itself to play the pass and ignore the feeble running attack.