The phrase "aligned to different" is not correct in standard written English.
It may be intended to express a relationship or connection to various elements, but it lacks clarity and completeness.
Example: "The strategies we developed are aligned to different objectives within the organization."
Alternatives: "aligned with various" or "aligned to diverse".
Reads with multiple alignments are more likely to be aligned to different locations by different aligners, due to the difference in alignment strategies these aligners employ, as well as the standards of how to randomly choose one alignment to report.
In pair-wise comparisons among all four aligners, we find that in both S1 and S2 data sets, suppressing multiple alignments decreases the number of reads aligned to different positions (class 2) in all comparison pairs, while the number of reads aligned to same positions (class 1) stays the same (Tables 5, 6, 7, 8).
If the top 20 BLASTX hits included different protein IDs and those multiple proteins aligned to different regions of the same assembled transcript (alignments could only overlap for at most 10 bases) then the assembled transcript was considered a potential chimeric.
Its alignment to sorghum sequence was puzzling because the six genes aligned to different regions of the sorghum genome.
Although this may seem inconsistent, further examination of the alignment of probes to gene revealed that different probesets for Tsn aligned to different populations of alternatively polyadenylated transcripts.
After alignment to these converted genomes, B-SOLANA determines the best alignment for each bisulfite sequence in the following way: bisulfite sequences that are aligned to different genomic positions in Conversions I and II are assigned to the position with the lowest number of mismatches.
These candidate regions were then supplied to Pindel [ 24], which detected structural variants based on different parts of a single sequence read aligning to different locations in the genome.
In detail, the link-score combined PEMPs that had unique, high-scoring alignments for both ends of each mate pair sequence, but with the two end sequences aligning to different non-adjoining superscaffolds.
He can easily verify how many sequences have been discarded during the alignment process and how many sequences have been aligned to the different chromosomes in the reference sequence.
We computed the time-course of the directional decoding performance of the LFP signal aligned to two different behavioral events, cue onset and movement onset.
Where available, gene transcripts were also downloaded from the Vertebrate Genome Annotation (Vega) database [39] at the Wellcome Trust Sanger Institute, which provides a database of manually curated transcript information aligned to a different chromosome build from Ensembl (as of build 36).
