Sentence examples for aligned set of from inspiring English sources

36 TM-MOTIF is a downloadable software tool and an effective alignment viewer to map discovered motifs and predicted membrane topology on an aligned set of OR sequences in VIBGYOR coloring scheme (refer Figure 3I).

To search sequence determinants related to the evolutionary pathways observed by MDS, the aligned set of active and supplementary sequences was divided into four groups, according to the MDS classification of the human counterparts (Table 1).

Briefly, an aligned set of adapted sequences (capable of H2H transmissibility) was compared against a reference set (not H2H-transmissible) to reveal mutations common in the adapted set, but rare in the reference set.

DeRIP can only choose within options provided by the aligned set of repeats.

To identify genes under positive selection in IRRB, the DnaSP program requires an aligned set of orthologous sequences [ 32].

The average of an aligned set of similar images should improve in contrast and visible detail during refinement, and the variance should decrease.

Ambiguous and uninformative alignment positions were removed from aligned sets of concatenated marker genes using gblocks (Castresana 2000) under default settings, with the exception that a conserved position was not allowed to have gaps in more than half of the sequences.

In brief, we aligned the nucleotide sequences based on their translated amino acid sequences, and the aligned sets of genes were concatenated for use in subsequent analyses.

Thus, the BRAliBase 2.1 contains in total 18,990 aligned sets of sequences; the individual sets consist of 2, 3, 5, 7, 10, and 15 sequences, respectively (see Table 1), with 20 ≤ APSI ≤ 95%%.

Using the aligned sets of proteins, the frequency of each amino acid at each position through the hydrophobic region was calculated and plotted as matrices for fungi and vertebrates.

Users can associate new sequences to a pre-aligned set of clusters using the sequence search option.