Sentence examples for aligned it to from inspiring English sources

We predicted the UGT1A1 secondary structure profile by using the neural network programs PSIPRED [ 75] and NNPREDICT [ 76], and aligned it to the structural alignment of known bacterial and plant GT-B crystal structures by using hidden Markov models (HMM) with manual adjustments [ 77].

We translated each ORF sequence into its corresponding protein and aligned it to three protein databases — Refseq, human-nr, and full-nr — in an iterative, subtractive fashion using BLASTP (see Methods).

Wei et al. [ 19] generated a sequence-ready physical map of maize and aligned it to the genome of rice, revealing its complex evolutionary history.

Thus, we re-sequenced the gene hp1018 and aligned it to the published genomic data of H. pylori Hp26695 (Figure 3).

In the course of our work, the first draft chicken genome assembly was released and we aligned it to our GGA2 RH map.

At the end of our work, the first draft chicken genome assembly was released and we aligned it to our GGA5 RH map.

That is, given a target protein sequence, we can predict its 3D structure by aligning it to structurally similar protein structures in PDB.

For example, SSAHA2 aligns read SRR003161.1261578 to X chromosome with mapping quality 244 and BWA-SW aligns it to chromosome 2 with identical alignment length and edit distance.

The 3′adaptor was removed by aligning it to the read, allowing one or two mismatches in prefix alignments of at least seven or ten bases, respectively.

Her Christmas homily dwells on the goodness, both physical and spiritual, that sports can promote — but in aligning it to the Christian faith, it fails to address the world.

Nevertheless, we estimate that roughly 94.4% of the genome sequence of FV-1 is contained in this dataset by aligning it to the highly similar strain CO92.