The phrase "aligned equally" is correct and usable in written English.
It can be used when discussing the arrangement or positioning of items or concepts in a way that ensures they are at the same level or have the same importance.
Example: "The two teams were aligned equally in their goals, ensuring a collaborative effort towards success."
Alternatives: "aligned on the same level" or "aligned in a balanced manner."
Default alignment policies of bowtie were enforced: a valid alignment could have a maximum of two mismatches and if a read aligned equally well to multiple places in the genome, one was chosen at random.
Default alignment policies of Maq were enforced: a valid alignment could have a maximum of two mismatches and if a read aligned equally well to multiple places in the genome, one was chosen at random.
Here, the common reads are the reads that aligned equally well to both parental genomes.
"When you date your picture and its various components has to be aligned equally as intelligently as the making of the picture itself," he said.
If a sequence read aligned equally well to more than one genomic locus, it was discarded.
Alignments were compared to determine which reads aligned better to the Tester or Line references and which reads aligned equally well to both the Tester and Line references.
Notice that this work only considers the case of aligned and equally spaced cameras, so that correlation between views decreases with their distance.
The anchoring mechanism consists of three axially aligned legs equally spaced around the capsule.
The ML method treats all of the aligned positions equally, ignoring the fact that some are more conserved than others.
The ML method treats all aligned positions equally, which is inconsistent with the fact that some positions are more conserved than others, and thus more important for protein alignment.
And as one might expect, the different introspective methods do not all align equally well with the different varieties of privilege.
