In contrast, brain homogenates show a relative increase in T-Tf (WB), Tf-1, and Tf-β2 in CJD+ relative to CJD- cases (Figure 1 A, lanes 14 17) (cut lanes were re-aligned for comparison. Original blot is shown in Figure S1).
The CDS were aligned for comparison.
The amino acid sequences for human CEP63 homologues in orangutan, crab-eating macaque, rat, mouse, chicken and zebrafish were aligned for comparison.
Some of the identified RAYTs, and all the TIRYTs listed in Figure 9, have been aligned for comparison (Additional file 5).
The sequence of the 16S rRNA gene from E. chaffeensis NS101 was most closely related (99.6% identity; 5 bases of 1,333 bp that can be aligned for comparison differed) to that of 5 human isolates: Arkansas (GenBank accession no.
The use of the CaRBCS1 [GenBank: AJ419826] cDNA from C. arabica as a query sequence identified several similar sequences in the coffee databases, and they were aligned for comparison.
The predicted amino acid sequences of UBA, ULA and the two open reading frames of UCAψ were aligned for comparison of the MHC class I genes encoded in the two regions (Fig. 4).
M73222) (8 ), Sapulpa (U60476) (9 ), 91HE17 (U23503 1010 ), St . Vincent(U86665) (11 ), and Jax (U86664) (11 ); the next closest sequence was from an E. chaffeensis isolate from A. testudinarium ticks in China (GenBank accession no. AF147752) (99.2% identity; 10 bases of 1,333 bp that can be aligned for comparison differed).
When E. chaffeensis NS101 was compared with Ehrlichia spp. previously identified in Japan, the sequence of the 16S rRNA gene (a 1,328-bp 1,328-bpthat can be aligned for comparisegment E. chaffeensis NS101 was 98.9%, 98.9%, and 98.6% identhatl to that of E. muris AS145 strain, Ehrlicana sp. HF565 (the HF strain, Ixodes ovatus Ehrlichia) and Candidatus Ehrlichia shimanensis TS37, respectively.
If the WCS info is defined for each system (or if they have the same image pixel scale), use "Frame → Match Frames" to align them for comparison.
To align coordinates for comparison and to calculate RMSD values between coordinates, the helical regions (9 29 (helix A), 43 62 (helix B), 82 94 (helix C), 108 128 (helix D), 134 152 (helix E), 178 191 (helix F), and 205 221 (helix G)) were used with the LSQMAN software [51].
