Substitution tolerance was estimated using the SIFT algorithm (Sorting Intolerant From Tolerant).
The split-reads are collected efficiently using the following algorithm: Sort all SV start and end breakpoints by chromosome and position.
The algorithm Sorting Intolerant From Tolerant (SIFT: http://blocks.fhcrc.org/sift/SIFT.html) was used to predict the functional effect of an amino acid substitution (AAS) according to sequence homology and the physical properties of amino acids.
The SIFT algorithm (sorting intolerant from tolerant) [ 45] was utilized to predict whether an amino acid substitution affects protein function based on the degree of conservation of amino acid residues in sequence alignments derived from closely related gene sequences.
Our greedy tiling algorithm sorts mapped tiles using Occam's razor principle.
As the first step, the algorithm sorts the test cases according to the profile.
Luckily there's TipSense, a new startup whose algorithm sorts big messy data sets.
Like RuleRank-CBA, the Hybrid-RuleRank algorithm sorts and ranks the association rules according to the support and confidence measures.
To choose which page(s) to evict, our algorithm sorts the candidates for replacement according to our replacement policy.
Most of conventional EVD algorithm sort eigenvalues in decreasing order, which we should only align eigenvector phases using 3.
