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Here, we introduce Weaver, an algorithm for the quantification and analysis of allele-specific copy numbers of SVs.
Here, we provide an in-depth overview of the BiNoM functions, and we also detail novel aspects such as the support of the BioPAX Level 3 format and the implementation of a new algorithm for the quantification of pathways for influence networks.
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In this work, we have studied the performance of PSF reconstruction algorithms for the quantification of tracer uptake in small, sub-centimeter lesions at varying lesion-to-background ratios.
In this study, we developed a new phantom to produce clinically relevant measurements to study the performance of PSF reconstruction algorithms for the quantification of small sub-centimeter lesions in direct contact with surrounding tissue.
Trained Genie classifiers were then combined with appropriately tuned image analysis algorithms for the quantification of different markers within each specific area.
The X-ray source moving beneath the subject emits a pencil beam or fan beam of X-rays at two energy levels, typically 40/70 or 43/110 keV (depending on the manufacturer), which allow algorithms for the quantification of two distinct tissue types.
This work describes the development and validation of a near infrared (NIR) spectroscopy method coupled with an appropriate multivariate calibration algorithm for the simultaneous quantification of encapsulated drug, simvastatin (SIM) and excipients, l-α-phosphatidylcholine (LPC) and cholesterol (CHO) in liposomes.
For such large-scale systems we demonstrate a robust quantitative image processing algorithm for the reproducible quantification of cell conglomerates on CD3 positive T cells in colorectal cancer.
We have established a novel algorithm for the identification, quantification and temporal tracking of mESC colonies.
To overcome some of these problems, van Soest et al. [ 14] proposed an algorithm for the automatic quantification of the optical attenuation coefficient in IVOCT images.
We also highlight novel functions that were implemented recently, such as the support of the latest BioPAX specification (BioPAX Level 3) and an algorithmic approach for the quantification of pathways on influence networks (PIQuant, Pathway Influence Quantification algorithm).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com