Sentence examples for algal sequences in from inspiring English sources

To investigate signal from algal sequences in Phytophthora genomes, two protein sequence databases were created.

We thank Wim Gillis for IT support and all who have deposited red algal sequences in Genbank over the years.

These cumulative problems associated with large and complex genomic datasets beg the question, what is the significance of finding a few dozen or even a few hundred "algal" sequences in a typical eukaryotic genome of perhaps 15000 genes?

A third set of entries was extracted by performing BLAST searches of sequences annotated in the previous steps against the remainder of red algal sequences in the local GenBank database for each target locus separately.

For example, the imposing 1,700 genes inferred to be of green algal origin in diatoms (Moustafa et al. 2009) was reduced to only 144 genes after more stringent criteria were applied, notably the mandatory presence of red algal sequences in the trees (Dorrell and Smith 2011).

As the grey reindeer lichen is a symbiotic organism comprising of two distinct genomes, the Asterochloris genome and the Cladonia rangiferina genome, the sequences were classified to identify their genome of origin, and to obtain an estimate of the ratio of fungal to algal sequences in the lichen transcriptome.

For GenBank accession numbers of newly determined sequences for the 29 Heterococcus strains see Additional file 2; the accession numbers for the four green algal sequences determined in this study are JX681197 - JX681200.

In Selaginellaceae, contamination by algal sequences was observed in a significant number of samples (7/16 samples for trnH-psbA); contaminated samples were removed from the analysis.

In one scenario (Fig.  8a), the phosphoacceptor aspartic acid residue of the PpPRRs and SmPRR7a/7b can be traced back to that found in the algal sequences; the phosphoacceptor residue in these sequences has never been substituted.

The C-terminal regions of the algal sequences are rich in positively charged residues, similar to those of SIPs and AQP11/12 where these residues have been suggested to have a function in ER retention [ 28].

Furthermore, the GGGAN motif of loop C is fully conserved in one of the algal sequences but only partially in the other sequence (L GAS N).