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Using simple rules based on the choice of a set of dihedral angles for assigning PPIIDSSP, led to a good agreement with the assignment made by other SSAMs.
This is in good agreement with the assignment of the two floras to distinct floral kingdoms (Cox 2001).
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All the signals have been assigned by using 1H-1H 2D NMR scalar chemical shift correlation spectroscopy, which gave results in agreement with the assignments reported in the literature [24].
Searching these genes against the RPSBLAST results that were stored in the ITEP database revealed that the large proteins from C. botulinum BKT105925 and C. novyi NT are in fact fusions of purD and purL, in agreement with the assignments based on MetaCyc [ 59], RAST [ 26], and the SEED [ 60].
In agreement with the structural assignment, absorption peaks at 1,384 and 839/cm (ν3 and ν2 vibration modes of NO3− with D3h symmetry) indicate that a large number of NO3− anions are included [19, 20].
This is in full agreement with the stereochemical assignment by MacMillan.
Marker order within the linkage groups for the buffalo chromosomes was consistent with the bovine genome assembly and, where information was available, in agreement with the cytogenetic assignment.
In agreement with the MLCT assignment, the rigidochromism is substantial; at 77 K the emission maximum blueshifts to 476 nm giving an excited-state energy of 21 000 cmore more than sufficient for sensitisation of the luminescent D0 state of EuIII at approximately 17 500 cm−17
Again, integrated H NMR data provides the primary characterization of this assignment, and integrations are largely in agreement with the assigned structure.
The class membership predictions for all data points were used to determine the assignment accuracy of the classifier, based on their agreement with the correct assignments.
In both concordance cases, namely for syntenic Inparanoid orthologs and non-syntenic non-Inparanoid orthologs, ICR is in strong agreement with the orthology assignments made by the two methods.
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