The phrase "adapt the alignment" is correct and usable in written English.
It can be used when discussing adjustments or modifications to the positioning or arrangement of elements, often in a technical or design context.
Example: "To improve the overall layout of the document, we need to adapt the alignment of the text and images."
Alternatives: "adjust the alignment" or "modify the alignment".
We adapted the alignment and classification methods to data from next-generation sequencing techniques to provide reliable information.
By adapting the profile alignment algorithm, the alignments from the STAP database remain intact, while gaps are inserted and nucleotides are trimmed for the query sequence according to the profile defined by the previous alignments from the databases.
After establishing the accuracy of the single exome analysis, we focused on adapting the Novoalign alignment pipeline for integration with SPLINTER.
Then, we performed forced alignment to adapt the utterances using a speech recognizer operating with the baseline speaker independent model and the lexicon containing all pronunciation variants of all words occurring in the orthographic transcripts.
Contrary to LANE runner v1 (Tzika et al. 2011) that used MUSCLE (Edgar 2004), LANE runner 2.0 uses Clustal Omega which is better adapted to the alignment of small fragments against a long reference sequence.
The device is composed by a rotating disk with a surface manufactured that simulates the tracer particles and by an alignment system to adapt the calibrator to different focal lengths and beam angles.
The F option was used to adapt the model to the empirical amino acid frequencies: The amino acid composition of the multiple sequence alignment.
The fitness function used adapted the Needleman-Wunsch alignment algorithm (a dynamic programming algorithm used to efficiently find similar regions between two sequences of DNA, RNA or protein. It can be used to efficiently compare code fragments) to increase the similarity between the two sets of code, allowing the derived refactoring sequences to remove code smells.
We have adapted the multi-genome alignment tool EvoPrinter to facilitate discovery of HGT DNA sequences within bacterial genomes and within their mobile genetic elements.
Maximum likelihood analyses were performed using RAxML 7.0.3 [ 98] adapting the program parameters to the alignment as described in the manual ("hard & slow way" - with 10 parsimony starting trees and 6 different rate categories).
