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The first of these looked at the associative correlations between miRNAs and the level of activation of a large compendium of pathways, inferred from gene-expression signatures.
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The term was combined with enkyklios ("complete system," or "circle") to identify a large compendium of general education, hence "encyclopaedia".
We used a large compendium of mRNA signatures derived from cells treated with drugs to investigate the mechanism of action of CG-mediated cytotoxicity [24].
We started from a large compendium of gene-expression experiments and inferred 878 putative regulatory interactions.
A large compendium of gene expression datasets, which covers about 466 growth conditions, was used for the analysis.
Figure 5 shows the MC signatures (sorted by size of the wild type MC) for a large compendium of metabolic gene networks.
We gathered a large compendium of data related to sequence, RNA structure, conserved domains, sequence similarity, and functional annotation of Arabidopsis and soybean transcripts.
The CMap is a large compendium of microarray experiments that measures the effect of over 1,000 compounds on gene expression in several cell lines [ 13].
The dedicated database consists in a large compendium of public data (more than 500 data sets) related to muscle (skeletal and heart).
Instead of the cell cycle gene expression data from Spellman et al. we included the data from Mnaimneh et al., a larger compendium of gene expression profiles [ 23].
Moreover they are available in an increasingly large compendium of spectrally-distinct variants.
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