Sentence examples for acid sequences were predicted using the from inspiring English sources

The signal peptide and location of cleavage sites within the amino acid sequences were predicted using the SignalP 4.1 server.

Secondary structures of the amino acid sequences were predicted using the PreSSAPro software (http://bioinformatica.isa.cnr.it/PRESSAPRO/).isa.cnr.it/PRESSAPRO/

The location of putative signal peptides of deduced amino acid sequences were predicted using the SignalP 3.0 Server with default parameters [ 48].

Potential transmembrane helices in the encoded amino acid sequences were predicted using the SOSUI engine v1.11 [ 77], TMHMM Server v2.0 [ 78] and Phobius [ 79], or via molecular wraps to resolved aquaporin structures (Additional file 5).

Potential Ser, Thr and Tyr phosphorylation sites in amino acid sequences were predicted using NetPhos 2.0 [ 63].

The CDS amino acids sequence was predicted using the Virtual Ribosome server [ 56].

The amino acid composition of products from NRPS sequences were predicted using NRPSpredictor 2 [ 91].

At the N terminus of this AS-protease sequence, presence of a signal peptide with 23 amino acids was predicted using the SignalP program (Bendtsen et al. 2004).

The structure of chicken TLRs was predicted using the SMART program [ 54] to analyse full length amino acid sequences.

Amino acid sequences were predicted in sense orientation using three methods.

The transmembrane domains on the OsSUT2 amino acid sequence were predicted according to the Hidden Markov Models using TMMOD software (Kahsay et al. 2005).