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The array data have been analysed both according to the present annotation and independently of any previous annotation, giving a more unbiased approach of analysis, and all transcripts have subsequently been categorized.
pseudonana, according to the present phylogeny.
Expression was called as present (P) or absent (A) according to the Affymetrix array analysis tools.
A total of 32 experiments were conducted according to the L32 array proposed by the method.
First, light field is reconstructed according to the image array captured by camera array.
For each strain we determined the structural variant present (or absent) in each of the targeted CNV regions, irrespective of whether the strain in question carried a corresponding CNV according to the 2.1M array experiment.
The fluorescent signals were detected according to the suspension array manufacturer's protocol.
The replicative stress is present already in the juvenile SC, as among the most relevant cellular functions altered already at PND10 were cellular proliferation, cell death, and cell cycle according to the array.
Arrays were processed with reagents according to the NimbleGen Arrays User's Guide version 5.0 in the Instrument System suggested.
According to the geometry of the array, PACT can be classified into linear-array PACT (LA-PACT) and circular-array PACT (CA-PACT).
For Affymetrix Gene Chips®, quality criteria include the actin (HSACO7) and GAPDH 3′/5′ ratios, the percent present calls according to the MAS5 algorithm, the array-specific scale factor and average background [see Hubbell et al. (2002) and the Affymetrix Statistical Algorithm Reference Guide].
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