The phrase "accommodate rate" is not correct and does not convey a clear meaning in written English.
It seems to be an incomplete or incorrect expression, and without additional context, it is difficult to determine its intended use.
Example: "We need to discuss the accommodate rate for our new clients."
Alternatives: "adjustment rate" or "accommodation fee".
A discrete-gamma model [53] was implemented to accommodate rate variation among sites for both ML and Bayesian analyses with four different categories.
For all analyses, we used the uncorrelated lognormal relaxed molecular clock to accommodate rate variation among lineages (25 ).
Thus, the use of a relaxed molecular clock approach designed to accommodate rate variation is preferable for estimating divergence ages with this data set.
Relative rate parameters were estimated in separate for each partition, in order to accommodate rate variation at the third codon position.
Bayesian phylogenetic inference was carried out using a GTR model with gamma distribution and 8 rate categories per partition (all parameters unlinked) and rate multipliers to accommodate rate differences among partitions.
Previous molecular phylogenetic work with such holoparasites highlighted the need to employ gene sequences from different subcellular compartments and analytical methods that accommodate rate heterogeneity, thus avoiding long-branch attraction artifacts [ 3].
As noted above, the UCLD model accommodates rate variation by assuming the branch-specific rates are lognormally distributed.
It accommodates rate variation across phylogenetic lineages and across families, does not assume equality of birth and death rates, and does not require an ultrametric tree with known branch lengths.
The disparity between molecular clock estimates and fossil evidence of clade age minima has diminished in association with the development of molecular clock methodology, particularly in accommodating rate variation.
In addition, we used partitioning in codon positions that allows different codon positions to have different substitution rates (and different amount of rate heterogeneity) (see Methods for details) [ 31, 45] thus further accommodating rate variation among synonymous and non-synonymous positions.
Thus, all MRI data are adjusted to accommodate for rate changes and the data are reflective of the ambient cardiac function and rate.
