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To test for marker-trait associations we first applied an approach that did not include any correction for the level of relatedness or structure between accessions (model 1).
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More generally, however, it is becoming increasingly clear that the EU needs to develop a new accession model for the western Balkan states.
For tests on M. × domestica accessions, the best model included the factor ' Malus species of origin' (BIC = 3709), significantly improving the null model (BIC = 3715; P < 0.001).
The accessions used for model development were selected from available seed stocks according to their morphology and growth habit.
The root proteome of two accessions of the model legume Medicago truncatula displaying differences in their resistance phenotype, in control as well as in inoculated plants, over two time points (21 and 25 days post infection), has been compared.
The number of genes per term, eQTLs observed and number of up-regulating allele from each parent is shown, as well as the P value associated with the allelic bias We have performed quantitative genetic analyses for genome-wide expression traits in a connected-cross set between three accessions in the model organism A. thaliana.
We estimated population-scaled recombination rates ρ = 4 Ne r (where Ne is the effective population size and r is the recombination rate) and locations of recombination hotspots using sequence data for three chromosomes from a range-wide collection of 26 accessions of the model legume M. truncatula.
In this study, we analyzed whole-genome resequence data from 26 accessions of the model legume Medicago truncatula to gain insight into the genomic features that are related to high- and low-recombination rates and recombination hotspots at 1 kb scales.
Therefore, no Protein ID is available and the TIGR gene model accession is given instead.
When omitting this accession from the model the assayed differences in four repeats explain up to 49percentt of measured genome size variation, and the 5S array is put at 2 Mbp in a 145 Mbp genome.
A total of highly genetically diverse 5000 SNPs with low missing rates and evenly distributed across the genome were selected to estimate the population structure of the 1857 accessions using a model-based approach [ 41] in STRUCTURE V2.3.3 [ 34].
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