Exact(4)
The data were composed of GEO accession, sample size, sample source, platform, and gene expression data.
The r value for LD estimation between these two SNPs is 0.41 in the whole accession sample.
The 64 accession sample did not show any genetic structure when it was analyzed with the model-based method.
b expected heterozygosity, c observed heterozygosity The genetic structure in the red-fruited accession sample was analyzed with the model-based clustering algorithm implemented in the Structure2.0 software (see Methods section for details).
Similar(56)
However, it was still difficult for us to deduce the original ancestor of the other rare alleles in the rice accessions because of the limited wild rice accession samples investigated in this study.
About sylvestris accession sampling, refer to Material and Methods described in [ 12].
Per-contig read counts were averaged across parental accession samples (cmsHA89, Pet2152) to generate mean parent values, and across samples from F1 hybrid plants.
Six wild accession samples were collected according to the geographic distribution of the wild soybean in Korea (Supplementary Table S1 and Fig. S1).
We also discuss that more field trials over successive years as well as more extensive accession sampling would be necessary to fully validate a fluctuating selection model.
Data from the four sequenced parental accession samples (HA89.5, HA89.9, PET.2, PET.3) were analyzed simultaneously using SAMtools 'mpileup' to identify single nucleotide polymorphisms (SNPs) with respect to the reference sequence.
The 384 data set, stored in db dbsnp, was generated by mass-spectrometry at 384 random loci across the genome in a 96-accession sample that differs from that of the 2010 data set.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com