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Taxonomy-independent methods, however, extract features from contigs to infer bins based on sequence composition, abundance, marker genes, time series abundance profiles or any combination of them (Wu et al., 2014; Kang et al., 2015; Lin and Liao, 2016).
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In this study the decision was taken not to immunodeplete the samples of high-abundance proteins, to ensure that all candidate markers were considered, given the observation that these immunodepletion methods can also deplete samples of low abundance markers that are associated with the abundant carrier proteins (Granger et al, 2005).
Actb and Actg were used as high and medium abundance markers, respectively; and Odc and Ppp1ca as low abundance markers [84].
In a sample that has undergone considerable fractionation, a greater proportion of observed proteins would be in the range classified as low-abundance markers and consequently less affected by the underreporting of the proteins amounts.
He refuses to rely on words to communicate a point, taking advantage of the display board and an abundance of marker pens to rapidly illustrate his approach to directing, painting, design.
on organelle properties such as size distribution or abundance of marker proteins.
However, the abundance, surface marker expression and osteogenic potential are different between MSCs isolated from diabetic and normal mice.
Serum nitrotyrosine abundance (a marker of nitrosative stress) was measured by ELISA.
The increasing abundance of marker data amplifies one of the essential statistical problems in such studies: the number of potential explanatory variables represented by single markers is often larger than the number of observations in the sample studied, and some regularization is required to ensure the identifiability of the marker effects.
As a result, gene-rich regions may contain an abundance of markers.
We have also included a discussion on the differences with previous studies with regards to the distribution and abundance of markers and progenitor types.
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