The phrase "above alignment" is not standard in written English and may cause confusion.
It could be used in contexts discussing alignment in a document or design, but it would need clarification or rephrasing for better understanding.
Example: "Please refer to the above alignment when adjusting the layout of the page."
Alternatives: "previous alignment" or "prior alignment".
However, upon closer inspection several positions with charged residues (highlighted red in the above alignment) align to hydrophobic residues (yellow).
In addition to minimizing overall visual distortion, we will use the above alignment process to help select starting points and/or order of enumeration for non-anchor slices by relating them to neighboring anchor slices.
Then, each gene portions were concatenated to make the above alignment datasets.
The GBlocks 0.91b program [ 70, 72] was then used to select the conserved blocks of the above alignment with the default parameters underlined.
Control PCL films non-covalently dyed with a comparable percentage of photochromic spiropyran 5, and subjected to the above alignment process did not display any mechanochromic behavior upon deformation.
If a set of volumes from the same location has no motion artifacts, or motion artifacts have been removed by motion correction, it should be possible to perfectly align the set of volumes with each other using quasi-rigid registrations that model the above alignment related effects.
As is seen in the above alignments, the two pathogen proteins share a significant sequence-identity region with human proteins, so they are candidates for generating an antibody response against the human protein with which they share this stretch of sequence.
The sequence collinearity and local rearrangements were identified based on the above alignments with a bit value > 200.
Following the above structural alignment, a pair of aligned SSEs should have a similar position and orientation in the superposition.
All of the above mentioned alignment methods are fully automated, i.e., they construct alignments following a fixed set of algorithmical rules.
The key concepts of the above global alignment algorithms are quite different.
