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In the future, a wide map of specific links at different levels of details between the BioObject structural elements and its elementary actions might open the way for new methods of structure function predictions.
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Qanbari et al. [ 18] employed an extended haplotype homozygosity test and published a genome wide map of recent selection within the German Holstein dairy cattle population.
This interesting distribution prompted us to generate a genome-wide map of ectopic CENP-A nucleosome residency in the genome.
AthaMap is a database that generates a genome-wide map of predicted transcription factor binding sites (TFBS) for Arabidopsis thaliana (6, 7).
In this work we present an initial compilation of a genome-wide map of genetic diversity in T. cruzi, and its functional analysis, focussed mostly on protein-coding regions of the genome.
For the LCR mediated NAHR translocations, a previous study has provided a genome-wide map of LCR substrates (Ou et al. 2011).
These data come from the chromatin-immunoprecipitation sequencing (ChIP-seq) protocol: chromatin is crosslinked to preserve DNA-protein and protein-protein bonds, then a target-specific antibody is used to capture the DNA proximally associated with a given protein, and this DNA is sequenced and aligned to a reference assembly to create a genome-wide map of protein occupancy [ 9].
First, a genome-wide map of the SNPs between the diploid A-genomes and D-genomes of cotton was created.
Additional validation of the predicted enhancer-gene relationships was obtained using a genome-wide map of enhancer-promoter associations constructed based on a DNase I comparative profiling of the human genome (Thurman et al. 2012).
We provide a genome-wide map of selection signatures in the chicken genome, and make a contribution to the better understanding the mechanisms of selection for AF content in chickens.
We presented a genome-wide map of genetic diversity (as estimated from expected heterozygosity, He) for a population resulting from mass selection in natural forests, with an estimated selection intensity of about 1.5 × 10-5[ 54].
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