Sentence examples for a very low depth from inspiring English sources

To test whether our plasmid samples were contaminated by nuclear DNA, we mapped all the reads to both chromosome and plasmid sequences, and found that a very small proportion of reads were mapped to the chromosome but generally at a very low depth (0∼3), which may result from nonspecific mapping.

According to (Peng et al., 2011), when the size of the component is small (with ≤ γ = 30 contigs), the component is likely to represent isoforms from a single gene and we can use a very low depth threshold β = 0.1 × T(comp), where T(comp) is the average depth of connected component comp, to prevent removing correct contigs.

The adjustments were corroborated by a small simulation, where estimates of relatedness appeared to be unbiased, except at very low depth.

However, the GC content correlation only becomes much weaker only at a very low sequencing depth (<2 million reads; Figure 1d).

The only exception was for conditions combining a very low read depth (N = 5) with a minor allele frequency of p = 0.50, in which case the observed data contain sparse information about the latent genotypes.

Generally, the difference between VariantMetaCaller and HaplotypeCaller was the lowest with the exception of very low depths, and except for SNPs with Bowtie 2 alignment where the best performing method varied depending on the coverage depth.

In five vancomycin sensitive (VSE) isolates PCR negative for vanA-B, SRST2 detected VanA-B sequences at very low depths (<0.2% of average depth), probably caused by minor but easily identifiable contamination during VRE-VSE multiplexed sequencing.

For this wooden sample that has a very low thermal diffusivity, a depth range of 2 mm was achieved.

The sharpness of the interface in SIMS measurements was characterized by the drop of the CoO– counts from 90%to10%0% of the CoO– counts measured in the center of the LSC film, yielding typical values of 2 3 nm (a very low value for SIMS depth profiling).

KinectFusion is a software that is able to capture a complete dataset of a 3D scene reconstruction using the Microsoft Kinect depth sensor at a very low cost.

For broadband antireflection or a wide range of incidence angles, a distinct structure depth together with a very low lateral structure size is required, which is difficult to realize.