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Fractional anisotropy (FA) is the DTI metric, which was commonly applied and measures preferential water diffusion along white matter tracts, and served as a usable marker of tissue integrity.
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Two SNPs (ALGA0066210 and ASGA0054360) were strongly associated with the SA defect and a haplotype of these SNPs appears to be a usable marker for marker assisted selection against the defect at least within the Finnish Yorkshire population.
Four in eight usable markers of the Jinuo population show departure from HWE, which suggests a sign of inbreeding in this 22,000-people ethnic group.
With the goal of a usable genetic marker in Actinidia, the female and male parents of an F1 Actinidia genetic mapping population [ 30] were also included.
The number of usable marker also decreased for other reasons, such as quality and marker redundancy.
A total of 232 polymorphic EST-SSR markers were genotyped in 92 BCIF BC1 hybrids, which produced 249 usable marker loci.
A total of 237 polymorphic EST-SSR markers were genotyped in 94 BCIB BC1 hybrids, which produced 258 usable marker loci.
Such a strategy drastically reduces the number of usable markers, especially when dealing with deep evolutionary relationships.
This low proportion of usable markers was due largely to the presence of sequences which, though unique in the assembly, were present in multiple copies in the genome.
Consolidating all the development and screening data since our initial studies [ 12], from 450 primer pairs designed, we obtained 300 operationally usable markers, i.e. a final efficiency of marker development of 67%.
Of these, 795 were considered as usable markers, and utilized in the construction of a HAPPY map.
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