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[ 29] resulting in a total alignment of 2,102 bp.
Individual protein alignments were then concatenated, resulting in a total alignment of 2489 amino acid sites.
This procedure resulted in a total alignment of 142 taxa with 8721 bp in length and a proportion of 60% gaps (Suppl. Table 5).
Gaps and ambiguous sites adjacent to gaps were removed, resulting in a total alignment of 10,587 nucleotides (3,529 amino acids).
Similar(56)
In this example, 9 residues are correctly aligned over a total alignment length of 10 residues.
Civil Engineers of the day devised a way, without computers or machine drills, to blast through 25,000 linear feet of dirt and rock (working from each side of the mountain), meeting in the middle with a total alignment error of less than an inch.
Sequences of 11 polymorphic nuclear markers were used for a total alignment length of 3037 bp.
The alignment of 126 gene sets were concatenated using the Phyutility software [ 71], building a total alignment length of 120,936 bps which was then used for the phylogenetic analysis performed by the FastTree2.1.3 [ 72] and processed using Dendroscope [ 73].
By applying the anchored hybrid enrichment (AHE) genome partitioning strategy to Aristolochia using an universal angiosperm probe set, we obtained 231 233 out of 517 single or low copy nuclear loci originally contained in the enrichment kit, resulting in a total alignment length of 154,756 bp to 160,150 bp.
1376 species remain in the alignment, spanning 374 genera, with a total alignment length of 22,612 sites (summarized in Table 1).
These include the rejection of reads with an overlap length less than 15 bases on one exon and with a total alignment length of less than 40 bases.
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CEO of Professional Science Editing for Scientists @ prosciediting.com