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Apart from the selection of a suitable docking tool, the success rate of VS tools depends strongly on various factors, such as the protonation/tautomerization state of the respective protein binding site residues [26] and of the input molecules [27 30], as well as the force field-minimized input conformation of the respective input molecules [31 35].
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The availability of suitable docking sites or specific partner proteins may play a role in stabilization (Le Rumeur et al., 1804).
Initially, selection of suitable docking program for our target of interest was possible by re-docking with GOLD, MOE, and Surflex programs.
As the residues in the binding domain have no significant variation, the crystallography structure of TRAF6 protein is a suitable receptor for docking simulation.
Businesses would be given subsidies to hire people on a temporary basis, with those refusing a suitable job having benefits docked.
Fes substrates such as cortactin and HS1 have multiple pTyr sites separated by spacers of a suitable length for such docking-dependent phosphorylation.
The structure-based molecular docking is considered a suitable approach for the development of new drugs, since this approach is targeted to specific protein and specific pathway [47].
Vorinostat is a chemical compound suitable for docking into the active site of HDAC of classes I, II and IV [ 5, 68].
I actually miss using my iPhone 4S dock, and I haven't found a suitable replacement.
A suitable villain.
A Suitable Fern Q.
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