Exact(1)
The ENMs generated using only a subset of localities from either the K1 or K3 regions resulted in range predictions with boundaries that broadly agreed with the full model, suggesting that parasitoids in each population may experience many of the same environmental conditions.
Similar(56)
A preliminary examination of DNA sequences of the mitochondrial Cytochrome Oxidase I gene (COI) for a subset of >40 localities from the Gulf of California and Baja Pacific that included multiple individuals per locality, revealed that most localities do not share haplotypes (Hurtado et al. unpublished).
As a first step, we fitted logistic regressions to a subset of training localities where the two species occurred allopatrically (n = 622; Table 1) (Hosmer and Lemeshow 2000): for localities where only An. coluzzii or An.
PCR was used to amplify a 530 base pair (bp) fragment of the mitochondrial gene cytochrome C oxidase II (COII) from a subset of flies from each locality following Beadell et al. [ 25].
Based on at least one representative specimen from each mitochondrial clade, we sequenced the first intron of the ribosomal protein S7 (965 bp, including gaps) for a subset of 19 specimens from 16 localities (Additional File 1).
In the last two analyses (PCoA and Bayesian clustering) in order to have a compensated number of samples due to software limitations, we used only a subset of the samples representing all localities and morphotypes of the fish with a maximum of 100 individuals per lake and species.
Its predictive performance was evaluated using the subset of localities where both species were recorded in sympatry (n = 518; Table 1) as an independent data set.
Analysis of the entire mitochondrial cytochrome b (Cytb) gene in 208 individuals from 147 localities and of a subset of individuals for three mitochondrial genes (Cytb, 16 S, and COI) and a single nuclear gene (RAG1) yielded similar topologies, recovering six major groups with significant phylogeographic structure.
From large series of specimens collected on the same date and in the same locality, we sampled only a subset of the most different morphs to minimize the chance of sampling siblings.
Additionally, the age distribution, incidence and locality data are taken from a subset of patients entering clinical trials.
We sequenced five nuclear loci for a subset of our samples that contained high quality DNA, which included 18 Aneides lugubris (representing 15 localities) and three outgroups (Aneides flavipunctatus-MVZ19969, A. vagrans-MVZ269484, and A.ferreus-MVZ269393).
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