Your English writing platform
Discover LudwigSuggestions(1)
Exact(3)
Such a stringency level consists of a minimal ratio for the gene expression in a target tissue (in our case placenta or fetal liver) compared to the median expression of that gene across all tissues examined.
A total of 190 sequences (60%%), out of 318 non-redundant ESTs, showed significant similarity to known gene sequences in the database with a stringency level (E value) of 10-3 and a score value higher than 80.
Using a stringency level of 95% sequence identity over a 40 bp overlap, 17 ESTs on chromosome 1 were assembled into 8 contigs and 14 ESTs on chromosome 5 were assembled into 7 contigs, giving a total of 15 contigs for both chromosome groups.
Similar(57)
For a given stringency level, the presence of a nucleosome is inferred, if the enrichment value is ≥ the value of the stringency level continuously at 4 probes (for distinct nucleosomes) or at >4 probes (for fuzzy nucleosomes) in all the three replicates in the dataset under study.
Overall, any phosphoSer/Thr site for which a prediction score was provided (at a particular stringency level, in the case of Scansite) was considered to be classified as 14-3-3-binding 14-3-3-binding 14-3-3-binding 14-3-3-binding
The processed ESTs from susceptible and resistant libraries were combined and assembled into contigs using the CAP3 program at a high stringency level of 95% homology in a 20-bp overlap.
The 85% SNP validation rate in our pooled sample, even at a high stringency level, indicated that 'paralogous' SNP is a problem for pooled samples.
Scansite3, a Java implementation of Scansite2, enables search for a fourth stringency level: minimum.
Although transcripts for omcE were not significantly different in current-producing and fumarate-grown biofilms at the high stringency value (p value.001), at a lower stringency level (p value.05) there did appear to be slightly higher transcript levels for omcE in the current-harvesting cells.
Whether this difference is the result of the new implementation of Scansite3, potentially setting new underlying stringency thresholds, or due to the addition of a minimum stringency level is not clear.
These two measures of dispersion were jointly used to detect the outlier transcripts at a moderate stringency level even if the distribution of signal-log ratios may not be normal in a group.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com