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Exact(13)
To do so, a segment of the ssrA gene was replaced with a synthetic duplex DNA that altered not only the Ala codons but also complementary bases predicted to participate in a stem structure such that the stability of this structural element would not be perturbed (Figure 1A).
The Willis lab demonstrated that the PTB1 binding site, a CCU repeat, can only internally initiate translation when present within a stem structure and not as single stranded RNA [31].
In contrast, in the presence of the NM_000093.3_c.925-2A>G mutheion, the pre-mRNA secondary structures changed and the acceptor-splice site shifted towards a "stem" structure, making this site less accessible for the spliceosome (Supplementary Figure S1).
The P3-loop is variable and can be extended into a stem structure for the two P. abyssi sRk48-like sequences.
In contrast, most adenosines in helix 45 and domain I were largely protected from chemical modification, consistent with a stem structure.
Six out of 19 mutant clones from the second round maintained the ability to form a stem structure similar to that of wild type.
Similar(47)
A plausible explanation arises from a simple modeling study (data not shown) that replaces the bulged-G motif with an A-form stem structure.
Six the remaining clones had the potential to form either a weak stem structure or a stem with a single mismatched position.
In addition to the enrichment for mutants maintaining the wild type stem, three clones have the potential to form an alternative stem structure with a four-nucleotide loop and a ΔG similar to the wild type stem.
The usual form of a sympodium is a horizontal rootlike stem structure called a rhizome that terminates each "branch".
The interaction of CL2 and cCL2 sequence motifs leads to the formation of a double-helical stem structure that contains an RNAaseIII processing site.
Related(20)
a stem configuration
a stalk structure
a tree structure
a stem problem
a business structure
a stem segment
a stem class
a stouter structure
a stem line
a price structure
a stem Passport
a stem endorsement
a stem profile
a performance structure
a stem student
a stem bender
a playground structure
a stem toy
a burning structure
a stem degree
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