For example, easy identification of a cell line appropriate for a specific experiment would be enabling, such as quickly filtering for a cell line with a specific HLA type and a specific gene expression.
If experimental data are not available, approaches such as log-linear kinetics and "convenience" kinetics require mining the literature for parameter values, which (aside from the skepticism about the validity of combining parameter values from different conditions to simulate a specific experiment) could be impractical for large-scale models.
The following figures present the arithmetic mean of all experiment runs for a specific experiment.
Second, for a specific experiment an appropriate statistical procedure might not even be available from the statistical literature.
Furthermore, it has been shown that breast cancer cell lines in many aspects mirror the heterogeneity in transcriptional and genomic aberrations found in breast tumors [23], [37], underlining the importance of selecting the appropriate cell line for a specific experiment.
The 'experiment query' allows searching for a specific experiment by names/keywords.
Detail of numbers of animals for a specific experiment is provided in the figure legends.
In the context of experiment design, we can only hope to compute the expected decrease in uncertainty for a specific experiment, and thus rank potential experiments according to their expected value, if the experimental outcome is predictable to some degree.
In the GUI, the user specifies model experiments to select and configure the components available in FSSIM-AM, because usually not all available components are needed for a specific experiment.
There is a clear relationship between the 15AA distance and the top-100 overlap, with the 10 proteins with the greatest distance consistently having overlaps <50, indicating that for all methods the difficulty of learning the 8mer profile for a specific experiment is related to whether there is a similar example in the training set.
