Sentence examples for a source of alignment from inspiring English sources

In order to identify de novo mutations, we consider that the best option is to maintain those sequences that match equally to more than one location, even though it could be a source of alignment errors due to homology between regions.

SAM has been used as a source of alignments for protein structure prediction to participate in the CASP structure prediction experiment and to develop a database of predicted proteins in the yeast species S. cerevisiae.

We had to develop model alignments as we started from gene families and not from a source of curated alignment as in PFAM [ 23].

For instance, RIO [ 18] starts from PFAM [ 23] as a source of curated alignments.

The large number of OTUs is potentially a biased source of alignment and phylogeny artefacts that could disrupt eukaryote monophyly.

To exclude co-optimality of MSA as a potential source of alignment error, we further performed the Heads or Tails (HoT) analysis [ 58] on the identified orthologs.

By using finite-conjugate imaging rather than the usual infinity-corrected objective lens, a tube lens is not required, removing a source of cost and alignment error.

A total of 239 transcripts were mapped to the non-coding RNA database of the Rfam [ 39– 43], which is also frequently used as a source of high-quality alignments for training and benchmarking RNA sequence analysis software tools.

Partial sequences are included because they provide additional data, however, they can be a source of spurious multiple sequence alignment, which require manual editing to correct the misalignment.

Heuristics present another source of alignment errors especially for short queries, because only a few valid unique seeds may exist between the aligned sequences.

This heuristic is the major source of alignment errors especially for short queries when there are only few valid unique seeds between the sequences to be aligned.