Sentence examples for a set of sequencing from inspiring English sources
The performance of the CORE database for identifying clinical sequences was compared to that of three publicly available databases, GenBank nr/nt, RDP and HOMD, using a set of sequencing reads that had not been used in creation of the database.
Based on sequence alignments of H5N1 and sequencing results (data not shown) from all the isolates, a set of sequencing primers were designed spanning a region of the HA informative with regards to clade, strain, receptor binding motif, cleavability and glycosylation (Figure 1) and which specifically hybridize to H5N1.
Any number of complex filters can be designed and applied to a set of sequencing reads.
We can lower the amount of memory required by exploiting the redundancy present in a set of sequencing reads by using a compressed index.
In cases where we were clarifying the sequence following a large detected "deletion" (missing sequence from what is predicted from the published sequence), we amplified a larger product and sequenced from a set of sequencing primers across both strands.
The PCR products were used for cycle sequencing with fluorescently labelled terminators (Big Dye; Applied Biosystems, Foster City, Calif., USA) as described by the manufacturer and with a set of sequencing primers developed for members of the phylum Proteobacteria [ 24].
For finding the relationship between one sequence and a set of sequences, we cannot apply the traditional LCS algorithms immediately.
Summarizing a set of sequences is an old topic that has been revived in the last decade, due to the increasing availability of sequential datasets.
Comparison methods may also be used to reveal some grouping within a set of sequences or to evaluate the strength of a predefined grouping of sequences.
Multiple Sequence Alignment (MSA) is a basic operation in Bioinformatics, and is used to highlight the similarities among a set of sequences.
A self-scaling BFGS is equipped with an adaptive nonmonotone technique that employs approximations of the Lipschitz constant and is tested on a set of sequence processing problems.
