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The MitoComp2 dataset [ 13] includes sequence and structural information about the orthologs of 68 D. melanogaster OXPHOS genes in a set of sequenced insect genomes diverging enough to make possible the investigation of long term trends in the evolutionary history of these gene.
The Drosophila Genome Reference Panel (DGRP) (Mackay et al. 2012) is a set of sequenced inbred lines derived from a single outbred population of Drosophila melanogaster.
To assess the completeness of the B. terrestris transcriptome represented in our data, we investigated the presence in BT_transcriptome_v2 of genes in conserved developmental and physiological pathways across a set of sequenced insect genomes.
A phylogenetic tree with all actins and ARPs of a set of sequenced genomes (P. tetraurelia, H. sapiens, D. melanogaster and S. cerevisiae) was created (Fig. 2) using PhyloDraw [ 30], (matrix: neighbor joining).
For this, the most relevant conditions to test P. freudenreichii for its activity of lactose fermentation and nitrate reduction were first determined by using a set of sequenced strains for which the expected phenotype could be predicted from their genotype.
The efficiency with which restriction fragments in experimental optical maps are found among the in silico optical map fragments in a set of sequenced genomes was determined by the program Efficiency, and the signal to noise ratio (ratio of correctly detected fragments to falsely detected fragments) was determined by S2N.
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These vectors form a set of sequences of length m.
We consider ZCZPS, is a set of sequences of length and is a set of sequences of the same length : (1).
The user provides a set of sequences, to which the NCBI BLAST tool [16] associates a set of similar sequences.
As already mentioned, a dialogue is a set of sequences of dialogically signed expressions.
Through this procedure, a set of sequences is generated and used to train the models.
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