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The method involves formulating the contact dynamics with a set of complementarity equations.
The layout of transit routes is explicitly modeled using an alternative approach by introducing a set of complementarity constraints.
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By duality theory, expressions (23) can be transformed into the following set of complementarity constraints [34].
We searched for high complementarity between a set of 1,984 sRNA sequences generated by deep sequencing of sRNAs from the A. thaliana rdr2-1 mutant [10] and 158 predicted mRNAs derived from the 117 up-regulated genes, allowing for three or fewer mismatches.
Target prediction by MicroCosm Targets database is performed on optimal sequence complementarity between a set of mature miRNAs and a given mRNA using an algorithm reflecting the weight of each base position and allowing mismatches at the 5' end of miRNA [87].
miRanda is an algorithm for finding genomic targets for microRNAs that incorporates current biological knowledge on target rules and computes optimal sequence complementarity between a set of mature microRNAs and a given mRNA using a weighted dynamic programming algorithm.
MiRanda is a bioinformatic tool for finding genomic targets for microRNAs that incorporates current biological knowledge on target rules and computes optimal sequence complementarity between a set of mature microRNAs and a given mRNA using a weighted dynamic algorithm [ 80- 82].
A model has thus emerged in which 'nonself' sequences, such as those introduced with transgenic DNA, is recognized by a set of piRNAs with some level of antisense complementarity.
Sarkar and Margules (2002) discuss the role of biodiversity surrogates, arguing that even the relative concept of complementarity has a "conventional" element built into it because it relies on "estimator" surrogates (say, a set of butterfly species) for "true" surrogates (say, the use of species as the basis for assessing complementarity of places).
Using a multi-sector equilibrium model of the Saudi energy system that handles administered prices in a mixed-complementarity formulation, we present results from a set of policy scenarios that lower oil consumption in the country.
To achieve tailored antibody-like diversity, we designed a set of skewed nucleotide mixtures yielding codons approximately matching the distribution observed in antibody complementarity-determining regions without incurring the expense of triphosphoramidite-based construction.
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