The phrase "a set of aligned" is correct and usable in written English.
It can be used when referring to a collection of items, ideas, or elements that are arranged in a straight line or are in agreement with each other.
Example: "The team presented a set of aligned goals to ensure everyone was working towards the same objectives."
Alternatives: "a collection of aligned" or "a group of aligned".
The workflow, built using web services from e-Fungi and EBI SOAPLab [ 47], retrieves the ESTs (that represent the ORF of interest), and generates a set of aligned EST sequences and an alignment plot.
The primary motivation for implementing a new tool was for development of our abYsis antibody database (http://www.abysis.org/), where we required a simple JavaScript component that would enable us to display a set of aligned sequences, sort and select sequences in that alignment for further analysis, and highlight regions of the alignment corresponding to the CDR loop regions of antibodies.
Given a set of aligned human silhouettes, the AME can be defined as follows: (1).
A fingerprint profile summarizes the information in a set of fingerprints, very much like a sequence profile or a position specific scoring matrix (PSSM) summarizes the information in a set of aligned sequences in bioinformatics.
The profile is a set of aligned sequences with gaps.
Sawyer's test assesses the likelihood for a set of aligned homologous sequences that the polymorphic fragments arose through recombination rather than mutation [20].
The ability to retrieve a complete set of aligned homeodomains from a range of species makes the Homeodomain Resource an invaluable first step in a phylogenetic analysis.
As a final consideration it should be noted that although the ML methods appear to be more accurate in reconstructing a phylogeny, there may exist several trees for a given set of aligned sequences that maximize the likelihood of the phylogeny [28].
Our composite model was designed to simulate a single set of aligned vertical cracks (HTI symmetry) filled with fluids.
The phylogenetic signal in a data set of aligned DNA or amino acid sequences can be investigated with the likelihood mapping method by analyzing groups of four sequences, randomly chosen, called quartets [32].
These models are generative and used dinucleotide and pentanucleotide frequencies collected from a training set of aligned nucleosome-bound sequence to predict histone DNA interactions.
