It displayed 27 polymorphic sites which were analysed excluding the primer-annealing regions in the a sequences whereas these regions were studied in the b and c sequences because they present a complete 5S + NTS units, respectively.
In terms of vocabulary, we define a "TE fragment" as a match between a TE consensus sequence and a genomic sequence, whereas we define a "TE copy" as a chain of matches, each match in the chain being a TE fragment.
A birth-death model of speciation was used with the WG and 3G-WG datasets, in which each species is represented by a single sequence, whereas a coalescent model was used with the 3G dataset, in which each species has multiple specimens.
We next investigated whether HPep1 and HPep6 bind the polysaccharide and lipid A moieties of LPS respectively, because HPep1 contains an A box domain protein sequence, whereas HPep6 contains a B box HMGB1 protein sequence and a part of the linker region, respectively (Fig. 2A).
The common concept of both alternative methods is that abundantly present transcripts will more easily find a complementary sequence, whereas rare transcripts have a much higher probability of remaining ss.
According to the genome annotation database, only one of the inserts did not contain an untranslated region upstream from a coding sequence whereas the 18 other candidates corresponded to 7 redundant putative promoter regions.
An NADH-dependent glutamate synthase (SP−/TP+) was also identified; however, the ChloroP TP prediction program predicted a cTP sequence, whereas other TP prediction programs (IPSort; PredSL) indicated an mTP.
The MMF operates on the temporal input data to obtain a desired sequence, whereas the 'CLEAN' algorithm works in the frequency domain to obtain a desired spectrum.
For example, E I E E I E I E E I E I E I is part of a rotation sequence, whereas E I E E I E E I E I E I E I is not.
