The phrase "a separate alignment of" is correct and usable in written English.
It can be used when discussing distinct arrangements or configurations in various contexts, such as design, organization, or data analysis.
Example: "The project requires a separate alignment of the data sets to ensure accurate comparisons."
Alternatives: "an independent arrangement of" or "a distinct configuration of".
A separate alignment of the barley HvOS1 and HvOS2 and different Type I MADS-box sequences was constructed for more clarity.
gambiae H1 candidate proteins (XP_311486) to a histone H1 protein from C. thummi, and examined the alignment for precise matches (Fig. 1A) that did not match well in a separate alignment of the An.
A separate alignment of the VP1 gene from these isolates together with consensus VP1 sequence from the different HEV71 genogroups (Brown et al., 1999; McMinn et al., 2001) and additional VP1 sequences of local CVA16 isolates was prepared.
In addition to the full protein alignments, we built a separate alignment for PDZ domains (as in ref [ 2] but with an extended gene sampling) and constructed specific alignments for the SAM and SH3 domains of Shank.
It is quite possible that a separate alignment method optimized for modeling may further improve the accuracy of predicted model.
A separate alignment was then edited manually for each allele.
The overall alignment of the six AAA protomers in midasin from human, yeast and Giardia was created by first making separate alignment of the three organisms for each of the six AAA protomers.
The resultant tree is a composite of separate alignments of the B-genome and A- plus D-genome ω-gliadin sequences since the repeat structure of 1B ω-gliadins is too diverged for realistic alignments with 1A and 1D ω-gliadin sequences.
To identify such sequence elements, we prepared separate alignments of sequences containing a C and those containing a T at the matK editing sites (henceforth called C-elements and T-elements, respectively).
Let us use the Ω1|3 notation for the model defined by M1 optimally aligned versus M 3. We start from separate alignments of M1 and M 2 with M 3 as a reference.
These consensus sequences are pre-created by separate alignments of the VH, Vκ and Vλ segments.
